STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21596.1Putative TetR-family transcriptional regulatory protein. (219 aa)    
Predicted Functional Partners:
EFL20433.1
Hydrolase.
     
 0.881
EFL21548.1
Putative integral membrane protein.
 
     0.756
EFL21549.1
Putative integral membrane protein.
 
     0.692
EFL21547.1
Putative integral membrane protein.
       0.605
EFL21488.1
Conserved hypothetical protein.
  
     0.586
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.586
EFL24990.1
Putative thymidylate kinase.
  
  
  0.583
EFL27131.1
Conserved hypothetical protein.
  
     0.542
EFL21599.1
Putative ferredoxin/ferredoxin-NADP reductase.
       0.538
EFL25165.1
Putative GAF domain protein.
  
   
 0.536
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.