Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21604.1Conserved hypothetical protein. (300 aa)    
Predicted Functional Partners:
EFL21916.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.971
EFL24220.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
 
 0.873
EFL27120.1
CbiG protein/precorrin-3B C17-methyltransferase.
    
 0.785
EFL20702.1
precorrin-3B C(17)-methyltransferase; Truncated CDS; unextendable partial coding region.
    
 0.784
EFL21918.1
Putative methyltransferase.
 
  
 0.784
EFL26640.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.771
EFL23401.1
Putative integral membrane protein; Overlaps another CDS with the same product name.
  
     0.768
EFL24248.1
Alanine-rich protein.
  
     0.765
EFL24701.1
Putative membrane protein.
  
     0.765
EFL25602.1
Putative secreted protein.
  
     0.764
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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