STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21606.1Putative integral membrane protein. (549 aa)    
Predicted Functional Partners:
EFL21607.1
AsnC family transcriptional regulator.
       0.808
EFL21605.1
Secreted protein.
       0.787
EFL21609.1
HAD-superfamily hydrolase subfamily IA.
       0.766
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
  
     0.735
EFL25861.1
Putative M6 family metalloprotease domain protein.
 
     0.726
EFL23408.1
Conserved hypothetical protein.
  
     0.722
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.706
EFL25409.1
Conserved hypothetical protein.
  
     0.703
EFL22770.1
Putative secreted protein.
  
     0.692
EFL25246.1
Putative integral membrane transport protein; Truncated CDS; unextendable partial coding region.
  
     0.686
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.