Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21639.1Conserved hypothetical protein. (373 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 0.952
EFL22260.1
Isochorismatase.
  
 0.943
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.926
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.897
EFL20373.1
Putative type I polyketide synthase WcbR.
  
 0.783
EFL21631.1
Non-ribosomal peptide synthetase, component; Overlaps another CDS with the same product name.
  
 0.755
EFL28780.1
Non-ribosomal peptide synthetase.
  
 0.755
EFL23220.1
Beta-ketoacyl synthase.
 
 
 0.737
EFL21629.1
Pyoverdine chromophore synthetase.
  
 0.734
EFL26045.1
Modular polyketide synthase.
 
 
 0.733
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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