STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21640.1Putative transcriptional regulator. (329 aa)    
Predicted Functional Partners:
EFL21987.1
Cytidine/deoxycytidylate deaminase, zinc-binding region.
   
  
 0.777
EFL25628.1
Putative phosphatase.
   
    0.770
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
   
  
 0.724
EFL23154.1
MarR family transcriptional regulator.
  
    0.715
EFL22273.1
Transcriptional regulator DarR.
   
    0.692
EFL28699.1
Transcriptional regulator DarR.
   
    0.692
EFL22538.1
LuxR family transcriptional regulator; Unextendable partial coding region.
 
    0.691
EFL26663.1
LuxR family transcriptional regulator.
  
    0.682
EFL21735.1
Leucine-responsive regulatory protein.
   
    0.680
EFL27016.1
Putative DNA-binding transcriptional regulator.
   
    0.664
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.