Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
EFL21647.1Putative ABC transporter, ATP-binding protein. (309 aa)    
Predicted Functional Partners:
EFL23171.1
Putative ABC transporter transmembrane protein.
 
     0.741
EFL28025.1
Putative ABC transporter integral membrane protein.
 
     0.664
EFL24435.1
ABC transporter membrane-spanning protein.
  
 
 0.661
EFL29308.1
Putative ABC transporter transmembrane protein.
 
     0.595
EFL22892.1
Putative ABC transporter, ATP binding protein.
  
  
  0.528
EFL29153.1
Putative ABC transporter, ATP-binding protein.
  
 
 0.494
EFL21646.1
Putative dolichyl-phosphate beta-glucosyltransferase.
 
 
   0.490
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.482
EFL22541.1
Putative ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
  
  
  0.477
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.457
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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