STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21657.1Endo-1,4-beta-xylanase A (Xylanase A) (1,4-beta-D-xylanohydrolase A). (682 aa)    
Predicted Functional Partners:
EFL21994.1
Cellulase.
  
     0.757
EFL28136.1
Feruloyl esterase B (Ferulic acid esterase B)(FAEB) (Cinnamoyl esterase).
 
     0.742
EFL22182.1
Methionine biosynthesis MetW; Belongs to the glycosyl hydrolase 43 family.
     0.741
EFL26420.1
Pectate lyase B.
  
     0.735
EFL28409.1
Putative pectinesterase/pectate lyase protein.
  
     0.728
EFL23090.1
Putative secreted lyase.
  
     0.713
EFL23091.1
Putative secreted lyase.
  
     0.712
EFL28212.1
Putative endo-1,4-beta-xylanase.
  
     0.706
EFL22993.1
Pectate lyase (PL); Truncated CDS; unextendable partial coding region.
  
     0.700
EFL26411.1
Glycoside Hydrolase Family 43.
  
     0.694
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.