STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21665.1Conserved hypothetical protein. (139 aa)    
Predicted Functional Partners:
EFL21664.1
Putative transcriptional regulator with cyclic nucleotide-binding domain (CrP/Fnr-family).
       0.773
EFL21675.1
Putative oxidoreductase; Unextendable partial coding region.
       0.605
EFL26498.1
Conserved hypothetical protein.
  
  
 0.554
EFL27620.1
Putative cytoplasmic protein.
  
  
 0.554
EFL21662.1
LigA protein; Overlaps another CDS with the same product name.
       0.513
EFL21663.1
LigA protein; Overlaps another CDS with the same product name.
       0.513
EFL22054.1
Squalene synthase HpnD.
     
 0.501
EFL22055.1
Squalene synthase HpnC.
     
 0.501
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
    
  0.493
EFL21666.1
Aliphatic sulfonates ABC transporter, permease.
       0.480
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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