Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21672.1Putative toxin-antitoxin system, toxin component. (73 aa)    
Predicted Functional Partners:
EFL21673.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.895
EFL21671.1
Putative PE-PGRS family protein.
       0.773
EFL22689.1
Putative toxin-antitoxin system, toxin component.
  
     0.745
EFL26822.1
Putative toxin-antitoxin system, toxin component.
  
     0.702
EFL22562.1
Conserved hypothetical protein.
  
     0.663
EFL22165.1
Putative toxin-antitoxin system, toxin component; Overlaps another CDS with the same product name.
  
     0.586
EFL28607.1
Hypothetical protein.
  
     0.586
EFL21055.1
Putative toxin-antitoxin system, toxin component.
  
     0.566
EFL24785.1
Integrase; Unextendable partial coding region; Belongs to the 'phage' integrase family.
  
     0.566
EFL24359.1
Putative toxin-antitoxin system, toxin component.
  
     0.550
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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