STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21679.1LacI family transcriptional regulator. (340 aa)    
Predicted Functional Partners:
EFL21681.1
L-rhamnose 1-epimerase.
 
     0.799
EFL21682.1
Rhamnose ABC transporter, rhamnose-binding protein.
 
 
  0.794
EFL21680.1
Conserved hypothetical protein.
       0.792
EFL29204.1
Putative transcriptional regulator.
  
     0.763
EFL20692.1
Regulatory protein, LacI.
  
     0.754
EFL21011.1
Putative DeoR-family transcriptional regulator.
  
     0.708
EFL21684.1
Putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.706
EFL21683.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.704
EFL26930.1
Glutamate synthase large subunit.
    
 
 0.681
rbsA
Ribose ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 
  0.607
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.