STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21681.1L-rhamnose 1-epimerase. (106 aa)    
Predicted Functional Partners:
EFL21690.1
Rhamnulokinase.
 
  
 0.969
EFL21682.1
Rhamnose ABC transporter, rhamnose-binding protein.
 
    0.965
EFL21688.1
L-rhamnose isomerase.
 
   
 0.939
EFL21689.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.924
EFL21680.1
Conserved hypothetical protein.
 
     0.896
EFL21684.1
Putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    0.865
EFL21683.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.859
EFL21679.1
LacI family transcriptional regulator.
 
     0.799
EFL26010.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
   
  
 0.681
EFL23352.1
Putative FGGY family carbohydrate kinase, N- domain protein.
  
  
 0.650
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.