STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21690.1Rhamnulokinase. (315 aa)    
Predicted Functional Partners:
EFL21688.1
L-rhamnose isomerase.
 
  
 0.983
EFL21689.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.941
EFL21691.1
Product YvfV.
 
     0.896
EFL21681.1
L-rhamnose 1-epimerase.
 
  
 0.882
EFL21692.1
Iron-sulfur cluster-binding protein.
       0.882
EFL21682.1
Rhamnose ABC transporter, rhamnose-binding protein.
 
  
 0.826
EFL21684.1
Putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.656
EFL21683.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.649
EFL23355.1
Putative FGGY family carbohydrate kinase, N- domain protein.
     
  0.622
EFL28184.1
Putative FGGY family of carbohydrate kinase, N- domain-containing protein.
     
  0.622
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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