Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21707.1Amino acid ABC transporter, permease PEB1. (216 aa)    
Predicted Functional Partners:
EFL21706.1
Glutamine ABC transporter, ATP-binding protein.
 
  
 0.996
EFL21708.1
Amino acid ABC transporter, permease.
 
  
 
0.987
EFL28979.1
Putative amino acid ABC transporter; Belongs to the bacterial solute-binding protein 3 family.
 0.974
EFL21709.1
Amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.970
EFL20467.1
Putative amino acid ABC transporter, ATP-binding protein.
 
 0.932
EFL20963.1
Putative amino acid ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
 
 0.932
EFL22407.1
Glutamate transport ATP-binding protein.
 
 0.932
EFL22783.1
Glutamate transport ATP-binding protein.
 
 0.932
EFL23313.1
Amino acid ABC transporter, ATP-binding protein.
 
 0.932
EFL27255.1
Amino acid ABC transporter, ATP-binding protein.
 
 0.932
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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