Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21711.1LigA protein. (271 aa)    
Predicted Functional Partners:
EFL21006.1
Conserved hypothetical protein.
 
     0.909
EFL21011.1
Putative DeoR-family transcriptional regulator.
 
     0.612
EFL21007.1
Putative 2-hydroxyacid-family dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.607
EFL28351.1
Putative 2-hydroxyacid-family dehydrogenase.
 
     0.554
EFL21010.1
Putative extracellular solute-binding lipoprotein.
 
     0.520
EFL22870.1
Putative multiple sugar transport system substrate-binding protein; Truncated CDS.
 
     0.496
EFL25978.1
Putative sugar phosphate isomerase/epimerase.
 
     0.476
EFL26960.1
Conserved hypothetical protein.
  
     0.462
EFL25969.1
Conserved hypothetical protein.
  
     0.458
EFL28244.1
Solute binding protein of ABC transporter system.
 
     0.458
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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