Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL21712.1Putative rhamnogalacturonan acetylesterase. (341 aa)    
Predicted Functional Partners:
EFL26282.1
Glycosyl hydrolase family 10.
 
 0.922
EFL21850.1
Hypothetical protein.
 
  0.836
EFL28409.1
Putative pectinesterase/pectate lyase protein.
 
  
 0.829
EFL27100.1
Pectinesterase (Pectin methylesterase) (PE).
 
  
 0.813
EFL28952.1
Pectinesterase (Pectin methylesterase) (PE).
 
  
 0.810
EFL20870.1
Putative di-trans,poly-cis-decaprenylcistransferase.
 
  
  0.803
EFL23089.1
FG-GAP repeat domain protein.
  
  0.787
EFL27099.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.774
EFL28332.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.774
EFL25044.1
alpha-N-arabinofuranosidase 2 (Alpha-N-arabinofuranosidase II) (Arabinosidase II) (Alpha-N-AFase II); Belongs to the glycosyl hydrolase 43 family.
  
     0.756
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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