STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21712.1Putative rhamnogalacturonan acetylesterase. (341 aa)    
Predicted Functional Partners:
EFL21850.1
Hypothetical protein.
 
  0.856
EFL26282.1
Glycosyl hydrolase family 10.
 
 0.847
EFL28409.1
Putative pectinesterase/pectate lyase protein.
 
  
 0.823
EFL27100.1
Pectinesterase (Pectin methylesterase) (PE).
 
  
 0.813
EFL28952.1
Pectinesterase (Pectin methylesterase) (PE).
 
  
 0.809
EFL23089.1
FG-GAP repeat domain protein.
 
  0.804
EFL20870.1
Putative di-trans,poly-cis-decaprenylcistransferase.
 
  
  0.801
EFL20866.1
exo-poly-alpha-D-galacturonosidase; Belongs to the glycosyl hydrolase 28 family.
 
  0.798
EFL27104.1
Putative pectate lyase.
  
  
  0.783
EFL27099.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.781
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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