STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21716.1ABC transporter, permease. (308 aa)    
Predicted Functional Partners:
EFL21714.1
Putative extracellular sugar-binding protein.
 
 0.997
EFL21715.1
Sugar ABC transporter, permease.
 
 0.981
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.950
EFL28085.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.941
EFL20410.1
ABC transporter, permease.
 
 0.881
EFL26255.1
Sugar ABC transporter, permease.
 
 0.879
EFL21704.1
Putative sugar transporter; Overlaps another CDS with the same product name.
 
 0.876
EFL26326.1
Sugar ABC transporter, permease.
 
 0.876
EFL29256.1
Putative sugar ABC transporter, sugar-binding protein.
 
 0.876
EFL28089.1
Sn-glycerol 3-phosphate transporter (ABC superfamily, membrane).
 
 0.871
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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