STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21720.1Ankyrin domain protein. (139 aa)    
Predicted Functional Partners:
EFL23898.1
Putative tetratricopeptide repeat protein.
  
 0.958
EFL28265.1
Putative LigA.
  
 0.957
EFL24562.1
Putative membrane protein.
  
 
 0.949
EFL25725.1
Mov34/MPN/PAD-1 family protein.
    
 0.887
EFL27601.1
Polyketide synthase; Truncated CDS.
   
 0.840
EFL21629.1
Pyoverdine chromophore synthetase.
  
 0.830
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.816
EFL22140.1
Polyketide synthase.
   
 0.807
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.802
EFL20420.1
Putative ribosylglycohydrolase (putative secreted protein).
   
 0.801
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.