STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21721.1Putative membrane protein. (593 aa)    
Predicted Functional Partners:
EFL21720.1
Ankyrin domain protein.
       0.780
ftsQ
Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.741
EFL22836.1
Hypothetical protein; Belongs to the WXG100 family.
   
 
 0.648
EFL29217.1
Conserved hypothetical protein; Belongs to the WXG100 family.
   
 
 0.648
EFL22843.1
Conserved hypothetical protein.
    
 
 0.593
EFL22832.1
Putative integral membrane protein.
  
 
 0.590
EFL24998.1
Secretion protein Snm4.
  
 
 0.590
EFL29214.1
Secretion protein Snm4.
  
 
 0.590
EFL23686.1
SMI1/KNR4 family protein; Truncated CDS; unextendable partial coding region.
   
 
 0.583
EFL25844.1
Hypothetical protein; Belongs to the WXG100 family.
   
 
 0.583
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.