STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21726.1Putative membrane protein. (285 aa)    
Predicted Functional Partners:
EFL27277.1
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Truncated CDS.
    
  0.892
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
  
  
  0.850
EFL21734.1
Putative amidohydrolase family protein.
  
    0.717
EFL20491.1
Putative amidohydrolase family protein.
  
    0.693
EFL28307.1
Amidohydrolase; Truncated CDS.
  
    0.693
EFL29304.1
Putative amidohydrolase family protein.
  
    0.693
lnt-2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.652
EFL26449.1
Malonyl CoA-acyl carrier protein transacylase.
    
  0.614
EFL21727.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.597
EFL21728.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.597
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.