STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21734.1Putative amidohydrolase family protein. (547 aa)    
Predicted Functional Partners:
EFL21735.1
Leucine-responsive regulatory protein.
       0.811
EFL21736.1
Conserved hypothetical protein.
       0.745
EFL21726.1
Putative membrane protein.
  
    0.717
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
 
     0.589
EFL27352.1
Putative peptidase family M20/M25/M40 protein.
 
   
 0.533
EFL22821.1
Putative tetratricopeptide repeat domain protein.
  
     0.501
EFL25349.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
     0.483
EFL25267.1
Chorismate mutase.
  
     0.480
EFL22332.1
Putative peptidase family M20/M25/M40 protein.
 
   
 0.443
EFL25350.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
     0.432
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.