Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21748.1Zinc finger, UBP-type. (87 aa)    
Predicted Functional Partners:
EFL27705.1
Putative thioredoxin reductase.
 
 
 
 0.760
EFL21747.1
Small heat shock protein C2; Belongs to the small heat shock protein (HSP20) family.
       0.616
EFL20663.1
E1-E2 family cation-transporting ATPase.
   
 
 0.521
EFL20694.1
Hypothetical protein.
    
 
 0.442
EFL20695.1
E1-E2 family cation-transporting ATPase.
    
 
 0.442
EFL28265.1
Putative LigA.
    
 0.418
EFL25839.1
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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