STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21754.1Putative transcriptional regulator, PadR family. (174 aa)    
Predicted Functional Partners:
EFL21755.1
Putative transporter.
 
    0.706
EFL21753.1
ArsR family transcriptional regulator.
  
    0.599
EFL21752.1
Putative cation efflux family protein.
       0.596
EFL21751.1
CAAX amino protease.
  
    0.512
EFL24694.1
Putative membrane protein.
 
   
 0.476
EFL24695.1
Inositol 1-phosphate synthase.
 
   
 0.475
EFL25281.1
Putative transcriptional regulator.
  
     0.432
EFL26169.1
Conserved hypothetical protein.
  
     0.420
EFL27506.1
Conserved hypothetical protein.
  
     0.418
EFL21053.1
55.5 kDa and 49.5 kDa sporulation proteins (ORF1590 and ORF1422).
  
    0.404
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.