STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21776.1Lysine monooxygenase. (569 aa)    
Predicted Functional Partners:
EFL21777.1
Delta-aminovaleramide aminohydrolase.
 
  
 0.961
EFL24232.1
Acetoin utilization protein AcuC.
   
 0.860
EFL28954.1
SNF2/helicase domain protein.
    
 0.832
EFL29064.1
Carbon-nitrogen family hydrolase.
 
  
 0.745
EFL24122.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.728
EFL20312.1
L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family.
    
  0.721
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.713
EFL25556.1
orn/DAP/Arg decarboxylase, family 2.
     
 0.713
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.710
EFL22567.1
Putative copper amine oxidase.
   
 
 0.693
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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