Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21785.1Putative secreted protein. (297 aa)    
Predicted Functional Partners:
EFL25948.1
S37 family peptidase.
 
     0.616
EFL21784.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.500
EFL24360.1
Putative membrane protein.
  
     0.449
EFL24995.1
Conserved hypothetical protein.
  
     0.444
EFL26272.1
roadblock/LC7 domain protein.
  
     0.444
EFL29062.1
Conserved hypothetical protein; Unextendable partial coding region; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.444
EFL26318.1
Conserved hypothetical protein.
  
     0.434
EFL25772.1
Conserved hypothetical protein.
  
     0.425
EFL28071.1
Putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily.
     
  0.416
EFL28697.1
roadblock/LC7 domain protein.
  
     0.410
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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