STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21820.1Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
EFL20465.1
Conserved hypothetical protein.
  
     0.743
EFL28194.1
Conserved hypothetical protein.
  
     0.644
EFL27086.1
Conserved hypothetical protein.
  
     0.621
EFL22597.1
PE-PGRS family protein.
  
     0.577
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
       0.574
EFL29392.1
LigA protein.
  
     0.556
EFL21016.1
PE-PGRS family protein.
  
     0.544
EFL23033.1
Hypothetical protein.
  
     0.524
EFL28193.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.503
EFL20680.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.