Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21845.1Conserved hypothetical protein. (409 aa)    
Predicted Functional Partners:
EFL21846.1
Conserved hypothetical protein.
 
     0.956
EFL21847.1
Putative DNA polymerase III epsilon subunit.
 
     0.786
EFL25251.1
Conserved hypothetical protein.
  
     0.773
EFL24807.1
Putative two-component system sensor kinase/response regulator, bifunctional protein.
  
     0.768
thrS
threonine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.767
EFL24349.1
Conserved hypothetical protein.
  
     0.765
EFL22755.1
Conserved hypothetical protein.
  
     0.763
EFL20566.1
Putative methyltransferase.
  
     0.743
EFL27303.1
Putative DNA methyltransferase.
  
     0.735
EFL23603.1
Putative regulatory protein.
  
     0.726
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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