STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21847.1Putative DNA polymerase III epsilon subunit. (241 aa)    
Predicted Functional Partners:
EFL24674.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 0.975
EFL24901.1
DNA polymerase III, subunits gamma and tau.
   
 0.972
EFL26170.1
DNA polymerase III, delta subunit.
    
 0.958
EFL26880.1
DNA polymerase III, alpha subunit; Truncated CDS; unextendable partial coding region.
  
 0.936
EFL24992.1
DNA polymerase III, delta' subunit.
  
 0.934
EFL25369.1
DNA polymerase III, alpha subunit.
   
 0.928
EFL23676.1
Putative transcriptional regulator.
  
 0.919
EFL22537.1
Putative DNA polymerase III epsilon subunit.
  
  
 
0.902
EFL27153.1
Putative DNA polymerase III epsilon subunit.
  
  
 
0.894
EFL27265.1
DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
   
 0.862
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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