Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21850.1Hypothetical protein. (898 aa)    
Predicted Functional Partners:
EFL25584.1
Conserved hypothetical protein.
     0.885
EFL28409.1
Putative pectinesterase/pectate lyase protein.
  
  
 0.868
EFL21712.1
Putative rhamnogalacturonan acetylesterase.
 
  0.836
EFL27102.1
Carbohydrate esterase, Family 12 YesY.
 
  0.825
EFL26420.1
Pectate lyase B.
  
  
 0.766
EFL21849.1
Polyketide cyclase/dehydrase superfamily protein.
       0.754
EFL26411.1
Glycoside Hydrolase Family 43.
  
 
  0.743
EFL20431.1
Conserved hypothetical protein.
 
  
  0.741
EFL28952.1
Pectinesterase (Pectin methylesterase) (PE).
  
  
 0.730
EFL23873.1
Putative secreted protein.
  
  
  0.721
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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