STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21852.1Putative ABC-type sugar transport system, permease component. (333 aa)    
Predicted Functional Partners:
EFL21853.1
Extracellular solute-binding domain protein.
 
  0.996
EFL21851.1
ABC transporter, permease.
 
  0.969
EFL29256.1
Putative sugar ABC transporter, sugar-binding protein.
 
 0.873
EFL25973.1
Putative ABC-type sugar transport system, permease component.
 
  0.868
EFL25135.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.861
EFL28356.1
ABC transporter, permease.
 
  0.861
EFL27073.1
Sugar ABC transporter, permease.
 
  0.853
EFL29254.1
ABC transporter, permease.
 
  0.853
EFL20981.1
ABC transporter, permease.
 
  0.852
EFL26326.1
Sugar ABC transporter, permease.
 
  0.852
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.