STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21858.1Putative membrane protein. (182 aa)    
Predicted Functional Partners:
EFL21857.1
Hypothetical protein.
       0.830
EFL21859.1
Conserved hypothetical protein.
       0.815
EFL25602.1
Putative secreted protein.
  
     0.764
EFL25532.1
Putative integral membrane protein.
  
     0.756
EFL21604.1
Conserved hypothetical protein.
  
     0.753
EFL24688.1
Putative membrane protein.
  
     0.741
EFL28321.1
Putative membrane protein.
  
     0.733
EFL25620.1
Lipoprotein LpqB; Truncated CDS; unextendable partial coding region.
  
     0.720
EFL26776.1
Conserved hypothetical protein.
  
     0.701
EFL27029.1
Conserved hypothetical protein.
  
     0.667
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.