STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21859.1Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
EFL21858.1
Putative membrane protein.
       0.815
EFL21857.1
Hypothetical protein.
       0.772
EFL23754.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
     
 0.702
EFL22809.1
Sensor histidine kinase/response regulator.
 
 
 0.673
EFL21822.1
Putative Membrane protein.
 
  
 0.649
EFL26927.1
DSBA oxidoreductase.
  
     0.631
EFL23146.1
Hypothetical hydrophilic protein.
  
    0.552
EFL27138.1
Sensor histidine kinase/response regulator.
   
 
 0.519
EFL25504.1
Conserved hypothetical protein.
  
 
 0.490
EFL21781.1
Putative integral membrane protein.
   
    0.487
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.