Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21910.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
EFL24357.1
Conserved hypothetical protein.
 
   0.782
EFL22564.1
Putative regulatory protein.
 
 
 0.777
EFL20853.1
Putative regulatory protein.
  
   0.771
EFL24016.1
Putative regulatory protein.
  
   0.753
EFL28471.1
Putative regulatory protein.
  
     0.721
EFL22481.1
Putative regulatory protein.
 
   0.717
EFL21938.1
Putative regulatory protein.
  
   0.704
EFL25802.1
Putative PAS/PAC sensor protein.
  
   0.671
EFL24265.1
Putative regulatory protein.
  
     0.664
EFL22168.1
Putative regulatory protein.
  
     0.662
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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