STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21911.1Conserved hypothetical protein. (519 aa)    
Predicted Functional Partners:
EFL21912.1
ASCH domain protein.
       0.890
EFL29471.1
LigA protein.
  
     0.758
EFL23505.1
Putative helix-turn-helix domain protein.
  
     0.742
EFL25739.1
Conserved hypothetical protein.
  
     0.709
EFL23810.1
Putative alpha/beta hydrolase family protein.
  
     0.688
EFL23509.1
Putative phosphotransferase enzyme family protein.
  
     0.671
EFL24013.1
Putative phosphotransferase enzyme family protein.
  
     0.665
EFL29472.1
Putative protoporphyrinogen oxidase.
  
     0.648
EFL25712.1
Conserved hypothetical protein.
  
     0.625
EFL25654.1
Putative DNA-binding protein.
  
     0.612
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.