Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFL21926.1 | EFL21927.1 | SSOG_01638 | SSOG_01639 | Putative acetyltransferase. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.543 |
| EFL21927.1 | EFL21926.1 | SSOG_01639 | SSOG_01638 | Putative RNA polymerase ECF-subfamily sigma factor. | Putative acetyltransferase. | 0.543 |
| EFL21927.1 | EFL22518.1 | SSOG_01639 | SSOG_02230 | Putative RNA polymerase ECF-subfamily sigma factor. | Anti-sigma factor, ChrR. | 0.572 |
| EFL21927.1 | EFL23362.1 | SSOG_01639 | SSOG_03076 | Putative RNA polymerase ECF-subfamily sigma factor. | Anti-sigma factor, family protein. | 0.521 |
| EFL21927.1 | EFL23439.1 | SSOG_01639 | SSOG_03153 | Putative RNA polymerase ECF-subfamily sigma factor. | Putative membrane protein. | 0.521 |
| EFL21927.1 | EFL24083.1 | SSOG_01639 | SSOG_03797 | Putative RNA polymerase ECF-subfamily sigma factor. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.573 |
| EFL21927.1 | EFL24227.1 | SSOG_01639 | SSOG_03941 | Putative RNA polymerase ECF-subfamily sigma factor. | Conserved hypothetical protein. | 0.554 |
| EFL21927.1 | EFL25040.1 | SSOG_01639 | SSOG_04754 | Putative RNA polymerase ECF-subfamily sigma factor. | Putative membrane protein. | 0.521 |
| EFL21927.1 | rpoA | SSOG_01639 | SSOG_03758 | Putative RNA polymerase ECF-subfamily sigma factor. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.565 |
| EFL21927.1 | rpoB | SSOG_01639 | SSOG_03798 | Putative RNA polymerase ECF-subfamily sigma factor. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.571 |
| EFL21927.1 | rpoZ | SSOG_01639 | SSOG_01506 | Putative RNA polymerase ECF-subfamily sigma factor. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.565 |
| EFL22518.1 | EFL21927.1 | SSOG_02230 | SSOG_01639 | Anti-sigma factor, ChrR. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.572 |
| EFL23362.1 | EFL21927.1 | SSOG_03076 | SSOG_01639 | Anti-sigma factor, family protein. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.521 |
| EFL23362.1 | EFL24227.1 | SSOG_03076 | SSOG_03941 | Anti-sigma factor, family protein. | Conserved hypothetical protein. | 0.408 |
| EFL23439.1 | EFL21927.1 | SSOG_03153 | SSOG_01639 | Putative membrane protein. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.521 |
| EFL24083.1 | EFL21927.1 | SSOG_03797 | SSOG_01639 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.573 |
| EFL24083.1 | rpoA | SSOG_03797 | SSOG_03758 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| EFL24083.1 | rpoB | SSOG_03797 | SSOG_03798 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| EFL24083.1 | rpoZ | SSOG_03797 | SSOG_01506 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
| EFL24227.1 | EFL21927.1 | SSOG_03941 | SSOG_01639 | Conserved hypothetical protein. | Putative RNA polymerase ECF-subfamily sigma factor. | 0.554 |
page 1 of 2