STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21928.1Glycerophosphodiesterase. (387 aa)    
Predicted Functional Partners:
EFL22885.1
Putative glycerophosphoryl diester phosphodiesterase.
    
 0.894
EFL24778.1
Lycerophosphoryl diester phosphodiesterase.
  
  
 
0.893
EFL26983.1
Glycerophosphodiesterase.
  
  
 
0.878
EFL26639.1
Glycerophosphodiesterase.
     
 0.877
EFL21929.1
Acyltransferase.
  
 
 0.814
EFL21541.1
Putative glycerophosphodiester phosphodiesterase.
  
  
 
0.686
EFL21926.1
Putative acetyltransferase.
  
    0.608
EFL26876.1
Alkaline phosphatase.
 
 
 0.544
EFL26633.1
Alkaline phosphatase; Truncated CDS.
 
 
 0.518
EFL27028.1
Endonuclease/exonuclease/phosphatase.
 
    
 0.515
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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