STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21931.1Putative oxidoreductase. (202 aa)    
Predicted Functional Partners:
EFL21932.1
Argininosuccinate lyase; Truncated CDS.
       0.882
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.803
EFL21224.1
TetR family transcriptional regulator.
       0.572
EFL21949.1
Pyridoxamine 5-phosphate oxidase-related, FMN-binding.
       0.572
EFL22710.1
Conserved hypothetical protein.
       0.572
EFL27316.1
Putative penicillin acylase.
  
     0.570
EFL24232.1
Acetoin utilization protein AcuC.
   
   0.489
EFL21934.1
Conserved hypothetical protein.
 
     0.462
EFL26939.1
Trypsin (SGT).
  
 
   0.457
EFL22746.1
Trypsin (SET).
  
 
   0.444
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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