STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21949.1Pyridoxamine 5-phosphate oxidase-related, FMN-binding. (196 aa)    
Predicted Functional Partners:
EFL21950.1
Sodium/bile acid transporter.
       0.827
EFL21948.1
Putative uroporphyrin-III c-methyltransferase.
       0.800
EFL21224.1
TetR family transcriptional regulator.
       0.605
EFL21931.1
Putative oxidoreductase.
       0.605
EFL21932.1
Argininosuccinate lyase; Truncated CDS.
       0.605
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.605
EFL21947.1
Membrane-associated lipoprotein involved in thiamine biosynthesis protein; Truncated CDS; unextendable partial coding region.
       0.605
EFL22710.1
Conserved hypothetical protein.
       0.605
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.543
EFL28758.1
Conserved hypothetical protein; Truncated CDS.
  
     0.414
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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