Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL21976.1Transcriptional regulator. (241 aa)    
Predicted Functional Partners:
EFL20356.1
Putative TetR-family transcriptional regulator.
  
     0.771
EFL27504.1
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1).
  
     0.771
EFL21232.1
TetR family transcriptional regulator.
  
     0.766
EFL27893.1
TetR family transcriptional regulator.
  
     0.765
EFL29235.1
TetR family transcriptional regulator.
  
     0.756
EFL21977.1
Putative short chain dehydrogenase.
 
     0.646
EFL21978.1
Hypothetical protein.
       0.529
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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