STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL21977.1Putative short chain dehydrogenase. (246 aa)    
Predicted Functional Partners:
EFL21630.1
Non-ribosomal peptide synthetase.
  
 
 0.769
EFL27601.1
Polyketide synthase; Truncated CDS.
  
 0.756
EFL21978.1
Hypothetical protein.
       0.732
EFL28729.1
Modular polyketide synthase.
 
 
 0.666
EFL28736.1
Polyketide synthase.
 
 
 0.659
EFL21976.1
Transcriptional regulator.
 
     0.658
EFL26930.1
Glutamate synthase large subunit.
    
  0.654
EFL20814.1
Modular polyketide synthase.
 
 
  0.628
EFL20601.1
Mycocerosic acid synthase.
 
 
 0.622
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.614
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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