Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL21984.1Putative limonene-1,2-epoxide hydrolase. (146 aa)    
Predicted Functional Partners:
EFL21982.1
Involved in polyketide synthesis.
 
    0.861
EFL21983.1
NAD-dependent epimerase/dehydratase.
 
     0.853
EFL21985.1
Prephenate dehydratase.
       0.773
EFL21986.1
Hypothetical protein.
       0.773
EFL24890.1
PE-PGRS family protein.
  
     0.749
EFL21987.1
Cytidine/deoxycytidylate deaminase, zinc-binding region.
       0.661
EFL22347.1
methylmalonyl-CoA mutase.
     
  0.647
EFL29092.1
Putative flavoCytochrome c.
  
  
  0.444
EFL28602.1
LigA protein; Unextendable partial coding region.
  
     0.439
EFL21958.1
Conserved hypothetical protein.
  
     0.424
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (10%) [HD]