Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22008.1Conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
EFL22581.1
Putative ATPase, AFG1 family protein.
  
     0.774
EFL22821.1
Putative tetratricopeptide repeat domain protein.
  
     0.774
EFL25349.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
     0.774
EFL25350.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
     0.774
EFL21801.1
Putative integral membrane protein; Truncated CDS; unextendable partial coding region.
  
     0.770
EFL25347.1
Succinate dehydrogenase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
     0.732
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.709
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.683
EFL25348.1
Succinate dehydrogenase, flavoprotein subunit.
  
     0.670
rpmI
Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.664
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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