STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22022.1TolC family type I secretion outer membrane protein. (235 aa)    
Predicted Functional Partners:
EFL22018.1
Glutamine synthetase.
 
 
 0.948
EFL22021.1
Ethanolamine permease.
  
  
 0.892
EFL26930.1
Glutamate synthase large subunit.
    
  0.880
EFL22016.1
Short-chain dehydrogenase/reductase family oxidoreductase.
 
   
 0.857
EFL22017.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.841
EFL22020.1
GntR-family transcriptional regulator.
 
   
 0.803
EFL20874.1
Putative glutamine synthetase.
  
 
 0.707
EFL26678.1
Glutamine synthetase, type I.
  
 
 0.707
EFL20742.1
Glutamine synthetase, type III; Truncated CDS; unextendable partial coding region; Belongs to the glutamine synthetase family.
  
 
 0.681
EFL26747.1
Glutamine synthetase, type I.
  
 
 0.681
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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