Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22031.1Conserved hypothetical protein. (363 aa)    
Predicted Functional Partners:
EFL22032.1
Conserved hypothetical protein.
 
     0.953
EFL22035.1
Conserved hypothetical protein.
 
     0.904
EFL22038.1
Radical SAM domain protein; Truncated CDS.
 
     0.883
EFL22037.1
Coproporphyrinogen III oxidase.
 
     0.864
EFL22036.1
Putative membrane-associated metal-dependent hydrolase.
 
     0.832
EFL22033.1
WGR domain protein.
 
     0.791
EFL22034.1
Putative cytoplasmic protein.
 
     0.785
EFL28479.1
Conserved hypothetical protein.
  
     0.740
EFL24079.1
Conserved hypothetical protein.
    
   0.732
EFL26271.1
Conserved hypothetical protein.
  
     0.715
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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