Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL22033.1WGR domain protein. (313 aa)    
Predicted Functional Partners:
EFL22038.1
Radical SAM domain protein; Truncated CDS.
 
    0.926
EFL22037.1
Coproporphyrinogen III oxidase.
 
    0.882
EFL22035.1
Conserved hypothetical protein.
 
    0.876
EFL22036.1
Putative membrane-associated metal-dependent hydrolase.
 
     0.873
EFL22032.1
Conserved hypothetical protein.
 
     0.848
EFL22031.1
Conserved hypothetical protein.
 
     0.791
EFL22034.1
Putative cytoplasmic protein.
 
    
0.562
EFL26205.1
Putative membrane protein.
  
     0.540
EFL25921.1
Conserved hypothetical protein.
  
     0.539
EFL26424.1
Putative transcriptional regulator, GntR family.
  
     0.469
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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