STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22034.1Putative cytoplasmic protein. (314 aa)    
Predicted Functional Partners:
EFL22038.1
Radical SAM domain protein; Truncated CDS.
 
    0.943
EFL22037.1
Coproporphyrinogen III oxidase.
 
    0.910
EFL22035.1
Conserved hypothetical protein.
 
    0.905
EFL22036.1
Putative membrane-associated metal-dependent hydrolase.
 
     0.903
EFL22032.1
Conserved hypothetical protein.
 
     0.830
EFL22031.1
Conserved hypothetical protein.
 
     0.789
EFL22033.1
WGR domain protein.
 
    
0.563
EFL25921.1
Conserved hypothetical protein.
  
     0.528
EFL26205.1
Putative membrane protein.
  
     0.522
EFL26424.1
Putative transcriptional regulator, GntR family.
  
     0.503
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.