Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL22038.1Radical SAM domain protein; Truncated CDS. (215 aa)    
Predicted Functional Partners:
EFL22037.1
Coproporphyrinogen III oxidase.
 
  
 0.972
EFL22035.1
Conserved hypothetical protein.
 
    0.971
EFL22036.1
Putative membrane-associated metal-dependent hydrolase.
 
     0.968
EFL22034.1
Putative cytoplasmic protein.
 
    0.941
EFL22033.1
WGR domain protein.
 
    0.926
EFL22032.1
Conserved hypothetical protein.
 
     0.894
EFL22031.1
Conserved hypothetical protein.
 
     0.883
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.624
EFL25921.1
Conserved hypothetical protein.
  
     0.515
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
     
  0.475
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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