STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22043.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
EFL22045.1
Conserved hypothetical protein.
     
 0.898
EFL22044.1
Alpha-galactosidase.
    
  0.851
EFL22027.1
Metallo-beta-lactamase.
     
 0.838
EFL29401.1
Collagen alpha-1(XI) chain protein.
  
   0.748
EFL21059.1
butyryl-CoA dehydrogenase.
      
 0.742
EFL21440.1
Lipolytic enzyme, G-D-S-L.
  
     0.734
EFL25584.1
Conserved hypothetical protein.
  
  0.727
EFL26282.1
Glycosyl hydrolase family 10.
  
 0.632
EFL22014.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.604
EFL28409.1
Putative pectinesterase/pectate lyase protein.
    
 0.576
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.