STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22054.1Squalene synthase HpnD. (316 aa)    
Predicted Functional Partners:
EFL22052.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 0.995
EFL21296.1
Phytoene dehydrogenase (Phytoene desaturase); Unextendable partial coding region.
 
 
 0.991
EFL22051.1
Squalene-hopene cyclase.
 
 
 0.964
EFL22053.1
Putative squalene/phytoene dehydrogenase.
 
  
 0.949
EFL24131.1
Trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase); Belongs to the FPP/GGPP synthase family.
  
 0.949
EFL22055.1
Squalene synthase HpnC.
 
   
0.943
EFL24395.1
Conserved hypothetical protein.
  
 0.924
EFL27154.1
C-5 sterol desaturase (Sterol-C5-desaturase).
  
 0.899
EFL26217.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.897
EFL25079.1
Conserved hypothetical protein.
     
 0.872
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.