Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL22054.1Squalene synthase HpnD. (316 aa)    
Predicted Functional Partners:
EFL22052.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 0.990
EFL21296.1
Phytoene dehydrogenase (Phytoene desaturase); Unextendable partial coding region.
 
 
 0.986
EFL22051.1
Squalene-hopene cyclase.
 
 
 0.958
EFL22053.1
Putative squalene/phytoene dehydrogenase.
 
  
 0.947
EFL22055.1
Squalene synthase HpnC.
 
   
0.925
EFL24395.1
Conserved hypothetical protein.
  
 0.894
EFL26217.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.868
EFL27154.1
C-5 sterol desaturase (Sterol-C5-desaturase).
  
 0.861
EFL20343.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2); truncated CDS; Belongs to the FPP/GGPP synthase family.
  
 0.840
EFL24131.1
Trans-hexaprenyltranstransferase (heptaprenyl diphosphate synthase); Belongs to the FPP/GGPP synthase family.
  
 0.839
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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