STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22055.1Squalene synthase HpnC. (289 aa)    
Predicted Functional Partners:
EFL22052.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
 0.973
EFL22053.1
Putative squalene/phytoene dehydrogenase.
 
  
 0.953
EFL22051.1
Squalene-hopene cyclase.
 
 
 0.950
EFL22054.1
Squalene synthase HpnD.
 
   
0.943
EFL21296.1
Phytoene dehydrogenase (Phytoene desaturase); Unextendable partial coding region.
 
 
 0.911
EFL27154.1
C-5 sterol desaturase (Sterol-C5-desaturase).
  
 0.899
EFL25079.1
Conserved hypothetical protein.
     
 0.872
EFL24115.1
NADH dehydrogenase I, H subunit.
   
 
 0.864
nuoH
NADH-quinone oxidoreductase, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
 0.864
EFL24116.1
Putative NADH dehydrogenase.
   
 0.863
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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