STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL22063.1Putative transferase; Truncated CDS; unextendable partial coding region; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (436 aa)    
Predicted Functional Partners:
EFL22062.1
Putative nucleotide sugar-1-phosphate transferase.
 
  
  0.947
EFL22060.1
Transferase.
 
     0.940
EFL22061.1
Putative glycerol 1-phosphate dehydrogenase.
 
   
 0.926
EFL22059.1
Putative glycosyltransferase.
 
     0.884
EFL22058.1
Putative ABC transporter membrane component.
 
     0.830
EFL22057.1
Teichoic acids export ATP-binding protein TagH (Teichoicacid-transporting ATPase).
 
    0.820
EFL22064.1
UDP-glucose 4-epimerase.
     
 0.770
EFL23423.1
Conserved hypothetical protein.
  
     0.757
EFL26882.1
Conserved hypothetical protein.
  
     0.747
EFL24688.1
Putative membrane protein.
  
     0.734
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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